Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | BK654_27695 | Not Available | Negative | 6341136 - 6342500 | 48705.8 |
| alpha-ketoglutarate permease | BK654_27700 | Not Available | Negative | 6342546 - 6343844 | 47398.7 |
| protocatechuate 3,4-dioxygenase subunit alpha | BK654_27705 | Not Available | Negative | 6343993 - 6344559 | 20699.4 |
| protocatechuate 3,4-dioxygenase subunit beta | BK654_27710 | Not Available | Negative | 6344561 - 6345265 | 26331.9 |
| 3-oxoadipyl-coa thiolase | BK654_27715 | Not Available | Negative | 6345303 - 6346505 | 41622.2 |
| 3-oxoadipate--succinyl-coa transferase subunit b | BK654_27720 | Not Available | Negative | 6346505 - 6347284 | 27202.5 |
| 3-oxoadipate--succinyl-coa transferase subunit a | BK654_27725 | Not Available | Negative | 6347284 - 6348141 | 31074.1 |
| 4-hydroxybenzoate transporter | BK654_27730 | Not Available | Negative | 6348431 - 6349777 | 47452.0 |
| iclr family transcriptional regulator | BK654_27735 | Not Available | Negative | 6349935 - 6350777 | 30674.9 |
| hypothetical protein | BK654_27740 | Not Available | Positive | 6351369 - 6351569 | 7959.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
