Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b6 | BK654_27390 | Not Available | Negative | 6253093 - 6254052 | 35407.0 |
| ggdef domain-containing response regulator | BK654_27395 | Not Available | Negative | 6254093 - 6255967 | 70445.3 |
| two-component system response regulator | BK654_27400 | Not Available | Negative | 6255964 - 6258255 | 85555.3 |
| two-component system response regulator | BK654_27405 | Not Available | Positive | 6258484 - 6259851 | 51581.2 |
| dna mismatch repair protein mutt | BK654_27410 | Not Available | Positive | 6260069 - 6260485 | 14700.9 |
| lysine transporter lyse | BK654_27415 | Not Available | Positive | 6260503 - 6261141 | 23007.8 |
| gnat family n-acetyltransferase | BK654_27420 | Not Available | Positive | 6261138 - 6261635 | 18949.1 |
| lysr family transcriptional regulator | BK654_27425 | Not Available | Negative | 6261810 - 6262727 | 34086.5 |
| alpha/beta hydrolase | BK654_27430 | Not Available | Positive | 6262945 - 6263964 | 36757.9 |
| lysr family transcriptional regulator | BK654_27435 | Not Available | Negative | 6263951 - 6264838 | 32662.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
