Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase f | BK654_27190 | Not Available | Negative | 6200522 - 6201982 | 54723.1 |
| phosphoribosylformylglycinamidine synthase | BK654_27195 | Not Available | Positive | 6202271 - 6206167 | 140616.0 |
| ngg1p interacting factor nif3 | BK654_27200 | Not Available | Positive | 6206172 - 6206483 | 11499.6 |
| pts n-acetyl-d-glucosamine transporter | BK654_27205 | Not Available | Negative | 6206751 - 6208466 | 60551.9 |
| phosphoenolpyruvate--protein phosphotransferase | BK654_27210 | Not Available | Negative | 6208500 - 6211013 | 89099.4 |
| iron dicitrate transport regulator fecr | BK654_27215 | Not Available | Negative | 6211056 - 6212066 | 35973.1 |
| n-acetylglucosamine-6-phosphate deacetylase | BK654_27220 | Not Available | Negative | 6212059 - 6213165 | 38881.8 |
| gntr family transcriptional regulator | BK654_27225 | Not Available | Negative | 6213183 - 6213914 | 27175.8 |
| hypothetical protein | BK654_27230 | Not Available | Positive | 6214684 - 6215022 | 12120.3 |
| hypothetical protein | BK654_27235 | Not Available | Negative | 6215286 - 6216365 | 39293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
