Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | BK654_27140 | Not Available | Negative | 6189606 - 6190034 | 16198.2 |
| leucyl aminopeptidase | BK654_27145 | Not Available | Negative | 6190095 - 6191585 | 52597.8 |
| lps export abc transporter permease lptf | BK654_27150 | Not Available | Positive | 6191899 - 6193020 | 41493.3 |
| lps export abc transporter permease lptg | BK654_27155 | Not Available | Positive | 6193013 - 6194074 | 38555.4 |
| elongation factor 4 | BK654_27160 | Not Available | Positive | 6194320 - 6196119 | 66361.1 |
| signal peptidase i | BK654_27165 | Not Available | Positive | 6196125 - 6196979 | 31919.0 |
| ribonuclease iii | BK654_27170 | Not Available | Positive | 6197163 - 6197852 | 25466.6 |
| gtpase era | BK654_27175 | Not Available | Positive | 6197845 - 6198747 | 33927.2 |
| dna repair protein reco | BK654_27180 | Not Available | Positive | 6198918 - 6199607 | 25063.3 |
| pyridoxine 5'-phosphate synthase | BK654_27185 | Not Available | Positive | 6199657 - 6200400 | 26604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
