Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate transporter | BK654_27090 | Not Available | Positive | 6178878 - 6180206 | 46268.6 |
| duf4440 domain-containing protein | BK654_27095 | Not Available | Positive | 6180295 - 6180765 | 17828.0 |
| hypothetical protein | BK654_27100 | Not Available | Positive | 6180805 - 6181128 | 11696.0 |
| glutathione s-transferase | BK654_27105 | Not Available | Positive | 6181208 - 6182143 | 33966.7 |
| nrdh-redoxin | BK654_27110 | Not Available | Negative | 6182264 - 6182620 | 13407.4 |
| nucleoid-associated protein yejk | BK654_27115 | Not Available | Negative | 6182620 - 6183624 | 37409.0 |
| dipicolinate synthase | BK654_27120 | Not Available | Positive | 6184021 - 6184302 | 9670.86 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | BK654_27125 | Not Available | Negative | 6184493 - 6185518 | 37947.5 |
| valine--trna ligase | BK654_27130 | Not Available | Negative | 6186127 - 6188973 | 107200.0 |
| dna polymerase iii subunit chi | BK654_27135 | Not Available | Negative | 6189233 - 6189598 | 13737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
