Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | BK654_27040 | Not Available | Positive | 6167490 - 6170276 | 104169.0 |
| atp-dependent rna helicase rhlb | BK654_27045 | Not Available | Negative | 6170354 - 6171820 | 54215.4 |
| carboxylesterase | BK654_27050 | Not Available | Negative | 6171920 - 6172576 | 24105.8 |
| amino acid abc transporter substrate-binding protein | BK654_27055 | Not Available | Positive | 6173049 - 6174080 | 36576.6 |
| amino acid abc transporter permease | BK654_27060 | Not Available | Positive | 6174146 - 6175327 | 43222.6 |
| amino acid abc transporter permease | BK654_27065 | Not Available | Positive | 6175338 - 6176435 | 40612.0 |
| glutamine abc transporter atp-binding protein | BK654_27070 | Not Available | Positive | 6176447 - 6177211 | 28866.4 |
| transcriptional regulator | BK654_27075 | Not Available | Negative | 6177271 - 6177753 | 18105.7 |
| motility quorum-sensing regulator mqsr | BK654_27080 | Not Available | Negative | 6177750 - 6178061 | 11792.0 |
| gntr family transcriptional regulator | BK654_27085 | Not Available | Positive | 6178229 - 6178888 | 24781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
