Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase | BK654_26940 | Not Available | Negative | 6142821 - 6143996 | 43645.7 |
| membrane-bound o-acyltransferase family protein | BK654_26945 | Not Available | Negative | 6144008 - 6145573 | 59006.0 |
| poly(beta-d-mannuronate) lyase | BK654_26950 | Not Available | Negative | 6145790 - 6146914 | 42143.0 |
| alginate o-acetyltransferase | BK654_26955 | Not Available | Negative | 6146938 - 6148386 | 53485.3 |
| poly(beta-d-mannuronate) c5 epimerase | BK654_26960 | Not Available | Negative | 6148398 - 6149987 | 58883.7 |
| transcriptional regulator | BK654_26965 | Not Available | Negative | 6150014 - 6151498 | 54992.4 |
| alginate biosynthesis protein | BK654_26970 | Not Available | Negative | 6151504 - 6152961 | 53067.0 |
| hemolysin d | BK654_26975 | Not Available | Negative | 6152971 - 6154140 | 42035.7 |
| glycosyl transferase | BK654_26980 | Not Available | Negative | 6154176 - 6155666 | 56290.2 |
| gdp-mannose dehydrogenase | BK654_26985 | Not Available | Negative | 6155759 - 6157075 | 47533.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
