Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | BK654_26825 | Not Available | Negative | 6095891 - 6097339 | 51312.1 |
| chemotaxis protein | BK654_26830 | Not Available | Positive | 6097682 - 6099733 | 74061.1 |
| catechol 1,2-dioxygenase | BK654_26835 | Not Available | Negative | 6099860 - 6100789 | 34198.1 |
| muconolactone delta-isomerase | BK654_26840 | Not Available | Negative | 6100844 - 6101134 | 11268.7 |
| muconate cycloisomerase | BK654_26845 | Not Available | Negative | 6101145 - 6102293 | 41151.8 |
| lysr family transcriptional regulator | BK654_26850 | Not Available | Positive | 6102419 - 6103324 | 32829.1 |
| mfs transporter | BK654_26855 | Not Available | Negative | 6103359 - 6104609 | 42857.0 |
| ureidoglycolate lyase | BK654_26860 | Not Available | Negative | 6104792 - 6105640 | 30445.4 |
| nad(p)-dependent oxidoreductase | BK654_26865 | Not Available | Negative | 6105678 - 6106418 | 25560.8 |
| mfs transporter | BK654_26870 | Not Available | Negative | 6106415 - 6107794 | 50071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
