Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_26575 | Not Available | Negative | 6047027 - 6047545 | 18648.0 |
| hypothetical protein | BK654_26580 | Not Available | Positive | 6047880 - 6048344 | 16456.0 |
| hypothetical protein | BK654_26585 | Not Available | Positive | 6048406 - 6049269 | 31800.8 |
| duf2063 domain-containing protein | BK654_26590 | Not Available | Positive | 6049250 - 6049990 | 27010.2 |
| transcriptional regulator | BK654_26595 | Not Available | Negative | 6050003 - 6050500 | 19074.7 |
| isochorismatase | BK654_26600 | Not Available | Positive | 6050655 - 6051281 | 23387.7 |
| methylmalonyl-coa epimerase | BK654_26605 | Not Available | Negative | 6051563 - 6052114 | 20656.2 |
| cytosine permease | BK654_26610 | Not Available | Negative | 6052161 - 6053591 | 51458.1 |
| fmn-dependent nadh-azoreductase | BK654_26615 | Not Available | Positive | 6053914 - 6054582 | 24936.7 |
| lysr family transcriptional regulator | BK654_26620 | Not Available | Negative | 6054591 - 6055532 | 34596.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
