Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | BK654_26470 | Not Available | Negative | 6023885 - 6025060 | 43800.0 |
| mannitol dehydrogenase | BK654_26475 | Not Available | Negative | 6025077 - 6026531 | 53160.5 |
| mfs transporter | BK654_26480 | Not Available | Negative | 6026554 - 6027846 | 46277.6 |
| alcohol dehydrogenase | BK654_26485 | Not Available | Negative | 6027925 - 6028956 | 37174.2 |
| bifunctional d-altronate/d-mannonate dehydratase | BK654_26490 | Not Available | Negative | 6029009 - 6030220 | 45411.3 |
| ketodeoxygluconokinase | BK654_26495 | Not Available | Negative | 6030225 - 6031217 | 35966.8 |
| dna-binding transcriptional regulator kdgr | BK654_26500 | Not Available | Positive | 6031372 - 6032154 | 29710.5 |
| bifunctional diguanylate cyclase/phosphodiesterase | BK654_26505 | Not Available | Negative | 6032197 - 6035091 | 107964.0 |
| peptide transporter | BK654_26510 | Not Available | Negative | 6035267 - 6037009 | 60947.7 |
| hypothetical protein | BK654_26515 | Not Available | Negative | 6037242 - 6037583 | 12174.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
