Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | BK654_26420 | Not Available | Positive | 6010637 - 6011596 | 34988.5 |
| diguanylate cyclase | BK654_26425 | Not Available | Positive | 6011600 - 6012553 | 36244.7 |
| alpha,alpha-trehalase | BK654_26430 | Not Available | Negative | 6012658 - 6014286 | 61605.1 |
| hypothetical protein | BK654_26435 | Not Available | Negative | 6014408 - 6014635 | 8576.17 |
| dehydrogenase | BK654_26440 | Not Available | Positive | 6014948 - 6015958 | 36555.9 |
| galactonate dehydratase | BK654_26445 | Not Available | Positive | 6015976 - 6017502 | 53297.6 |
| gntr family transcriptional regulator | BK654_26450 | Not Available | Positive | 6017552 - 6018256 | 26169.3 |
| hypothetical protein | BK654_26455 | Not Available | Positive | 6018721 - 6019401 | 23704.6 |
| hypothetical protein | BK654_26460 | Not Available | Negative | 6020129 - 6021838 | 63125.3 |
| hypothetical protein | BK654_26465 | Not Available | Positive | 6022902 - 6023522 | 23512.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
