Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BK654_26370 | Not Available | Positive | 5995781 - 5996563 | 28309.3 |
| fis family transcriptional regulator | BK654_26375 | Not Available | Negative | 5996555 - 5997658 | 40908.4 |
| hydrolase | BK654_26380 | Not Available | Positive | 5997981 - 5999243 | 46077.2 |
| hypothetical protein | BK654_26385 | Not Available | Positive | 5999363 - 6000697 | 48911.3 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BK654_26390 | Not Available | Positive | 6000736 - 6001839 | 40657.8 |
| tetr family transcriptional regulator | BK654_26395 | Not Available | Negative | 6001888 - 6002499 | 23157.8 |
| gaba permease | BK654_26400 | Not Available | Positive | 6002878 - 6004278 | 50252.4 |
| peptidase | BK654_26405 | Not Available | Positive | 6004638 - 6006359 | 61973.1 |
| secretion protein hlyd | BK654_26410 | Not Available | Positive | 6006352 - 6007722 | 49264.2 |
| abc transporter | BK654_26415 | Not Available | Positive | 6007725 - 6009074 | 49219.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
