Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose abc transporter atp-binding protein | BK654_26265 | Not Available | Negative | 5974626 - 5976182 | 56373.6 |
| d-xylose abc transporter substrate-binding protein | BK654_26270 | Not Available | Negative | 5976367 - 5977368 | 35941.3 |
| xylose isomerase | BK654_26275 | Not Available | Negative | 5977585 - 5978901 | 49156.9 |
| xylr family transcriptional regulator | BK654_26280 | Not Available | Positive | 5979055 - 5980242 | 43371.2 |
| saccharopine dehydrogenase | BK654_26285 | Not Available | Positive | 5980308 - 5981435 | 39818.0 |
| hypothetical protein | BK654_26290 | Not Available | Positive | 5981438 - 5981929 | 18227.2 |
| thiol-disulfide oxidoreductase | BK654_26295 | Not Available | Negative | 5981938 - 5982390 | 17418.2 |
| gnat family n-acetyltransferase | BK654_26300 | Not Available | Negative | 5982473 - 5982985 | 19251.8 |
| hypothetical protein | BK654_26305 | Not Available | Negative | 5983007 - 5983369 | 13650.7 |
| hypothetical protein | BK654_26310 | Not Available | Negative | 5983427 - 5984149 | 26262.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
