Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit gamma | BK654_26215 | Not Available | Positive | 5963326 - 5963808 | 17404.9 |
| formate dehydrogenase | BK654_26220 | Not Available | Positive | 5963802 - 5965361 | 54785.9 |
| formate dehydrogenase subunit alpha | BK654_26225 | Not Available | Positive | 5965358 - 5968234 | 104974.0 |
| formate dehydrogenase | BK654_26230 | Not Available | Positive | 5968231 - 5968452 | 8277.98 |
| hypothetical protein | BK654_26235 | Not Available | Positive | 5968563 - 5970233 | 60234.5 |
| isochorismate-pyruvate lyase | BK654_26240 | Not Available | Negative | 5970284 - 5970604 | 12034.3 |
| cysteine hydrolase | BK654_26245 | Not Available | Negative | 5970664 - 5971182 | 18239.2 |
| fructose-bisphosphate aldolase | BK654_26250 | Not Available | Negative | 5971553 - 5971828 | 9980.89 |
| hypothetical protein | BK654_26255 | Not Available | Positive | 5973141 - 5973440 | 11184.0 |
| sugar abc transporter permease | BK654_26260 | Not Available | Negative | 5973489 - 5974625 | 39962.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
