Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | BK654_26065 | Not Available | Positive | 5932719 - 5934143 | 50600.0 |
| aspartate aminotransferase | BK654_26070 | Not Available | Positive | 5934140 - 5935351 | 43355.8 |
| amino acid abc transporter | BK654_26075 | Not Available | Positive | 5935348 - 5936082 | 26494.9 |
| amino acid abc transporter | BK654_26080 | Not Available | Positive | 5936072 - 5936863 | 29133.2 |
| phosphate abc transporter atp-binding protein | BK654_26085 | Not Available | Positive | 5936850 - 5937686 | 30479.7 |
| cysteine dioxygenase | BK654_26090 | Not Available | Positive | 5937718 - 5938323 | 22315.4 |
| cystathionine beta-lyase | BK654_26095 | Not Available | Positive | 5938369 - 5941128 | 99775.9 |
| abc transporter | BK654_26100 | Not Available | Negative | 5941224 - 5942303 | 39040.7 |
| glucosamine-fructose-6-phosphate aminotransferase | BK654_26105 | Not Available | Negative | 5942334 - 5943287 | 33854.5 |
| abc transporter permease | BK654_26110 | Not Available | Negative | 5943311 - 5944186 | 31878.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
