Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK654_26015 | Not Available | Positive | 5924188 - 5925099 | 33546.4 |
| arac family transcriptional regulator | BK654_26020 | Not Available | Negative | 5925115 - 5926020 | 32619.7 |
| hypothetical protein | BK654_26025 | Not Available | Positive | 5926131 - 5926478 | 12063.5 |
| hypothetical protein | BK654_26030 | Not Available | Positive | 5926667 - 5926876 | 7530.79 |
| hit family protein | BK654_26035 | Not Available | Positive | 5926963 - 5927406 | 16368.8 |
| chemotaxis protein | BK654_26040 | Not Available | Negative | 5927452 - 5929095 | 57757.4 |
| dna repair protein | BK654_26045 | Not Available | Positive | 5929319 - 5929849 | 19990.2 |
| lysr family transcriptional regulator | BK654_26050 | Not Available | Negative | 5929875 - 5930732 | 32082.8 |
| amino acid abc transporter | BK654_26055 | Not Available | Positive | 5930975 - 5931817 | 30436.7 |
| amino acid abc transporter | BK654_26060 | Not Available | Positive | 5931871 - 5932722 | 30585.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
