Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK654_25915 | Not Available | Negative | 5899841 - 5900749 | 34224.5 |
| hypothetical protein | BK654_25920 | Not Available | Positive | 5901914 - 5902432 | 19049.3 |
| short-chain dehydrogenase | BK654_25925 | Not Available | Positive | 5902501 - 5903253 | 25934.1 |
| alpha/beta hydrolase | BK654_25930 | Not Available | Positive | 5903310 - 5904326 | 36512.7 |
| polysaccharide lyase family 7 protein | BK654_25935 | Not Available | Positive | 5904564 - 5905229 | 24995.8 |
| amidase | BK654_25940 | Not Available | Negative | 5905281 - 5906996 | 60480.7 |
| gntr family transcriptional regulator | BK654_25945 | Not Available | Positive | 5907254 - 5907985 | 27513.1 |
| mfs transporter | BK654_25950 | Not Available | Positive | 5908120 - 5909409 | 46394.2 |
| hypothetical protein | BK654_25955 | Not Available | Positive | 5909437 - 5910267 | 30875.3 |
| chemotaxis protein | BK654_25960 | Not Available | Positive | 5910391 - 5911746 | 49231.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
