Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase | BK654_25865 | Not Available | Positive | 5889595 - 5890371 | 28650.8 |
| mfs transporter | BK654_25870 | Not Available | Negative | 5890386 - 5891591 | 43223.7 |
| lysr family transcriptional regulator | BK654_25875 | Not Available | Positive | 5891737 - 5892672 | 33891.9 |
| amino acid transporter | BK654_25880 | Not Available | Negative | 5892664 - 5893644 | 34069.7 |
| lysr family transcriptional regulator | BK654_25885 | Not Available | Positive | 5893737 - 5894678 | 34414.2 |
| glutathione transferase gsta | BK654_25890 | Not Available | Negative | 5894667 - 5895278 | 22545.4 |
| transcriptional regulator | BK654_25895 | Not Available | Positive | 5895428 - 5896354 | 33868.8 |
| eama family transporter | BK654_25900 | Not Available | Negative | 5896346 - 5897236 | 31565.4 |
| lysr family transcriptional regulator | BK654_25905 | Not Available | Positive | 5897383 - 5898237 | 31012.8 |
| hypothetical protein | BK654_25910 | Not Available | Negative | 5898244 - 5899605 | 48350.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
