Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK654_25760 | Not Available | Positive | 5868953 - 5869744 | 29028.1 |
| tetr family transcriptional regulator | BK654_25765 | Not Available | Negative | 5869794 - 5870366 | 21330.7 |
| amidase | BK654_25770 | Not Available | Positive | 5870485 - 5871921 | 50199.9 |
| gntr family transcriptional regulator | BK654_25775 | Not Available | Negative | 5872518 - 5873261 | 26943.3 |
| abc transporter | BK654_25780 | Not Available | Positive | 5873397 - 5874236 | 30977.4 |
| aliphatic sulfonate abc transporter substrate-binding protein | BK654_25785 | Not Available | Positive | 5874233 - 5875234 | 36162.8 |
| abc transporter permease | BK654_25790 | Not Available | Positive | 5875242 - 5875991 | 27317.0 |
| hypothetical protein | BK654_25795 | Not Available | Positive | 5876052 - 5878421 | 87288.9 |
| decarboxylase | BK654_25800 | Not Available | Positive | 5878564 - 5879370 | 28424.2 |
| galactose 1-dehydrogenase | BK654_25805 | Not Available | Positive | 5879462 - 5880388 | 33708.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
