Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | BK654_25610 | Not Available | Negative | 5834871 - 5835866 | 36184.0 |
| lysr family transcriptional regulator | BK654_25615 | Not Available | Positive | 5835979 - 5836902 | 34405.6 |
| hypothetical protein | BK654_25620 | Not Available | Negative | 5837005 - 5838150 | 39121.2 |
| hypothetical protein | BK654_25625 | Not Available | Positive | 5838401 - 5839510 | 38797.7 |
| hypothetical protein | BK654_25630 | Not Available | Positive | 5840157 - 5841029 | 30737.7 |
| hypothetical protein | BK654_25635 | Not Available | Positive | 5841204 - 5842409 | 42415.5 |
| phosphonate abc transporter, permease protein phne | BK654_25640 | Not Available | Negative | 5842426 - 5843193 | 26866.3 |
| abc transporter permease | BK654_25645 | Not Available | Negative | 5843190 - 5844017 | 29727.9 |
| phosphonate abc transporter | BK654_25650 | Not Available | Negative | 5844011 - 5844808 | 28447.7 |
| putative selenate abc transporter substrate-binding protein | BK654_25655 | Not Available | Negative | 5844805 - 5845656 | 30698.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
