Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | BK654_25510 | Not Available | Negative | 5806635 - 5807672 | 35994.1 |
| hypothetical protein | BK654_25515 | Not Available | Positive | 5807902 - 5812737 | 179309.0 |
| peptide abc transporter substrate-binding protein | BK654_25520 | Not Available | Positive | 5812920 - 5813924 | 36942.5 |
| acylase | BK654_25525 | Not Available | Negative | 5813974 - 5816322 | 85459.7 |
| fe2+ zn2+ uptake regulation protein | BK654_25530 | Not Available | Positive | 5816622 - 5817002 | 13650.6 |
| hypothetical protein | BK654_25535 | Not Available | Negative | 5817012 - 5817200 | 6998.08 |
| hypothetical protein | BK654_25540 | Not Available | Negative | 5817356 - 5817556 | 7139.74 |
| mfs transporter | BK654_25545 | Not Available | Positive | 5817811 - 5819046 | 43387.0 |
| acyl-protein synthase | BK654_25550 | Not Available | Positive | 5819076 - 5820203 | 41625.4 |
| long-chain-fatty-acyl-coa reductase | BK654_25555 | Not Available | Positive | 5820205 - 5822616 | 87589.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
