Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c39 | BK654_25410 | Not Available | Positive | 5785533 - 5786213 | 25457.2 |
| hypothetical protein | BK654_25415 | Not Available | Positive | 5786275 - 5787021 | 25405.0 |
| hypothetical protein | BK654_25420 | Not Available | Positive | 5787068 - 5788351 | 46284.3 |
| fis family transcriptional regulator | BK654_25425 | Not Available | Negative | 5788495 - 5789820 | 49646.7 |
| hypothetical protein | BK654_25430 | Not Available | Positive | 5790160 - 5790426 | 9797.61 |
| hypothetical protein | BK654_25435 | Not Available | Positive | 5790611 - 5791900 | 45901.5 |
| na+/h+ antiporter nhab | BK654_25440 | Not Available | Positive | 5791995 - 5793497 | 54711.2 |
| hydrolase | BK654_25445 | Not Available | Negative | 5793605 - 5794426 | 29428.4 |
| glucose-6-phosphate dehydrogenase | BK654_25450 | Not Available | Negative | 5794423 - 5795943 | 56112.6 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | BK654_25455 | Not Available | Negative | 5795940 - 5796920 | 35212.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
