Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | BK654_25255 | Not Available | Positive | 5751955 - 5753247 | 48304.1 |
| arac family transcriptional regulator | BK654_25260 | Not Available | Positive | 5753338 - 5754243 | 34652.4 |
| sugar abc transporter substrate-binding protein | BK654_25265 | Not Available | Positive | 5754449 - 5755759 | 47857.8 |
| sugar abc transporter permease | BK654_25270 | Not Available | Positive | 5755917 - 5756849 | 33893.5 |
| sugar abc transporter permease | BK654_25275 | Not Available | Positive | 5756860 - 5757690 | 30850.5 |
| abc transporter atp-binding protein | BK654_25280 | Not Available | Positive | 5757730 - 5758833 | 39789.5 |
| mannitol dehydrogenase | BK654_25285 | Not Available | Positive | 5758849 - 5760330 | 54634.0 |
| xylulokinase | BK654_25290 | Not Available | Positive | 5760546 - 5762033 | 52235.4 |
| carbohydrate kinase | BK654_25295 | Not Available | Positive | 5762046 - 5762984 | 33807.5 |
| hypothetical protein | BK654_25300 | Not Available | Positive | 5763179 - 5763442 | 9595.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
