Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate isomerase | BK654_25155 | Not Available | Positive | 5730521 - 5730913 | 14671.5 |
| mfs transporter | BK654_25160 | Not Available | Positive | 5730965 - 5732269 | 46841.0 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | BK654_25165 | Not Available | Positive | 5732282 - 5733085 | 29417.3 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | BK654_25170 | Not Available | Positive | 5733100 - 5733897 | 28057.9 |
| homoprotocatechuate degradation operon regulator, hpar | BK654_25175 | Not Available | Negative | 5733965 - 5734387 | 16071.9 |
| flavin oxidoreductase | BK654_25180 | Not Available | Negative | 5734622 - 5735563 | 34744.1 |
| acyl-coa dehydrogenase | BK654_25185 | Not Available | Negative | 5735635 - 5736804 | 42984.1 |
| helix-turn-helix transcriptional regulator | BK654_25190 | Not Available | Positive | 5737088 - 5737747 | 24694.8 |
| molybdenum cofactor biosynthesis protein f | BK654_25195 | Not Available | Positive | 5737833 - 5738654 | 30753.1 |
| 3-oxoacyl-acp reductase | BK654_25200 | Not Available | Positive | 5738647 - 5739447 | 27808.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
