Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_24955 | Not Available | Positive | 5686686 - 5687714 | 36687.1 |
| dihydrodipicolinate synthase family protein | BK654_24960 | Not Available | Positive | 5687900 - 5688817 | 33217.1 |
| damage-inducible protein dinb | BK654_24965 | Not Available | Positive | 5689037 - 5689591 | 21447.5 |
| hypothetical protein | BK654_24970 | Not Available | Positive | 5689617 - 5689967 | 12896.5 |
| hypothetical protein | BK654_24975 | Not Available | Positive | 5689967 - 5690470 | 17953.5 |
| butanediol dehydrogenase | BK654_24980 | Not Available | Negative | 5690524 - 5691618 | 38481.8 |
| acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit | BK654_24985 | Not Available | Negative | 5691673 - 5692785 | 39765.5 |
| alpha-ketoacid dehydrogenase subunit beta | BK654_24990 | Not Available | Negative | 5692785 - 5693801 | 36383.0 |
| abc transporter substrate-binding protein | BK654_24995 | Not Available | Negative | 5693851 - 5694828 | 34761.1 |
| atp-nad kinase | BK654_25000 | Not Available | Negative | 5694831 - 5695913 | 37995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
