Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyproline-2-epimerase | BK654_24905 | Not Available | Positive | 5677121 - 5678053 | 33242.4 |
| d-amino-acid oxidase | BK654_24910 | Not Available | Positive | 5678050 - 5679165 | 39672.9 |
| (2fe-2s)-binding protein | BK654_24915 | Not Available | Positive | 5679158 - 5679394 | 8247.07 |
| fad/nad(p)-binding oxidoreductase | BK654_24920 | Not Available | Positive | 5679391 - 5680647 | 44549.7 |
| arac family transcriptional regulator | BK654_24925 | Not Available | Positive | 5680909 - 5681658 | 27960.7 |
| amino acid abc transporter substrate-binding protein | BK654_24930 | Not Available | Positive | 5681890 - 5682708 | 29416.2 |
| hypothetical protein | BK654_24935 | Not Available | Positive | 5682719 - 5684497 | 62759.4 |
| abc transporter permease | BK654_24940 | Not Available | Positive | 5684490 - 5685155 | 24832.0 |
| amino acid abc transporter | BK654_24945 | Not Available | Positive | 5685165 - 5685815 | 23844.1 |
| glutamine abc transporter atp-binding protein | BK654_24950 | Not Available | Positive | 5685808 - 5686530 | 26130.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
