Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK654_24855 | Not Available | Negative | 5665541 - 5666956 | 50630.3 |
| lysr family transcriptional regulator | BK654_24860 | Not Available | Positive | 5667047 - 5667943 | 32814.9 |
| duf4440 domain-containing protein | BK654_24865 | Not Available | Positive | 5668091 - 5668525 | 15883.1 |
| lysr family transcriptional regulator | BK654_24870 | Not Available | Negative | 5668639 - 5669562 | 34470.4 |
| 4-oxalocrotonate tautomerase | BK654_24875 | Not Available | Positive | 5669691 - 5669897 | 7815.28 |
| tonb-dependent receptor | BK654_24880 | Not Available | Negative | 5670098 - 5672239 | 78283.3 |
| hypothetical protein | BK654_24885 | Not Available | Negative | 5673304 - 5673552 | 8990.84 |
| gntr family transcriptional regulator | BK654_24890 | Not Available | Negative | 5673555 - 5674952 | 51683.2 |
| mfs transporter | BK654_24895 | Not Available | Positive | 5675095 - 5676261 | 39938.7 |
| gntr family transcriptional regulator | BK654_24900 | Not Available | Positive | 5676341 - 5677012 | 25524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
