Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | BK654_24755 | Not Available | Negative | 5641211 - 5642731 | 54967.0 |
| dehydrogenase | BK654_24760 | Not Available | Negative | 5642995 - 5644770 | 64455.4 |
| mbl fold metallo-hydrolase | BK654_24765 | Not Available | Negative | 5645048 - 5645983 | 34146.1 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | BK654_24770 | Not Available | Negative | 5646000 - 5646758 | 27724.4 |
| amino acid abc transporter substrate-binding protein | BK654_24775 | Not Available | Negative | 5646769 - 5647644 | 32991.2 |
| cytochrome c-550 pedf | BK654_24780 | Not Available | Negative | 5647650 - 5648111 | 16415.3 |
| quinonprotein alcohol dehydrogenase | BK654_24785 | Not Available | Positive | 5648363 - 5650240 | 68426.2 |
| hypothetical protein | BK654_24790 | Not Available | Positive | 5650388 - 5651032 | 23299.5 |
| dna-binding response regulator | BK654_24795 | Not Available | Negative | 5651211 - 5651849 | 23290.6 |
| sensor histidine kinase | BK654_24800 | Not Available | Negative | 5651849 - 5653105 | 46051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
