Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | BK654_24655 | Not Available | Negative | 5614215 - 5616851 | 96503.7 |
| carboxylate-amine ligase | BK654_24660 | Not Available | Negative | 5616848 - 5618011 | 43391.1 |
| sam-dependent methyltransferase | BK654_24665 | Not Available | Negative | 5617983 - 5618984 | 36425.2 |
| hypothetical protein | BK654_24670 | Not Available | Negative | 5618994 - 5620379 | 51885.4 |
| sodium:proton antiporter | BK654_24675 | Not Available | Positive | 5620626 - 5621963 | 47790.1 |
| gntr family transcriptional regulator | BK654_24680 | Not Available | Negative | 5622436 - 5623149 | 26276.5 |
| feruloyl-coa synthase | BK654_24685 | Not Available | Negative | 5623357 - 5625234 | 68280.8 |
| salicylaldehyde dehydrogenase | BK654_24690 | Not Available | Negative | 5625377 - 5626825 | 50332.6 |
| p-hydroxycinnamoyl coa hydratase/lyase | BK654_24695 | Not Available | Negative | 5626934 - 5627764 | 30993.3 |
| marr family transcriptional regulator | BK654_24700 | Not Available | Positive | 5627980 - 5628468 | 17669.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
