Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK654_24500 | Not Available | Positive | 5581111 - 5582130 | 36930.5 |
| abc transporter substrate-binding protein | BK654_24505 | Not Available | Positive | 5582114 - 5583118 | 36001.2 |
| abc transporter permease | BK654_24510 | Not Available | Positive | 5583179 - 5583988 | 28408.4 |
| abc transporter permease | BK654_24515 | Not Available | Positive | 5583985 - 5584779 | 28905.5 |
| abc transporter atp-binding protein | BK654_24520 | Not Available | Positive | 5584776 - 5585807 | 37051.1 |
| phosphodiesterase | BK654_24525 | Not Available | Positive | 5585832 - 5586662 | 30566.7 |
| porin | BK654_24530 | Not Available | Positive | 5586851 - 5588170 | 47233.1 |
| hypothetical protein | BK654_24535 | Not Available | Negative | 5588278 - 5589018 | 27737.0 |
| 2fe-2s ferredoxin | BK654_24540 | Not Available | Positive | 5589281 - 5589754 | 16169.4 |
| carbon monoxide dehydrogenase | BK654_24545 | Not Available | Positive | 5589767 - 5592007 | 79813.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
