Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein impa | BK654_24450 | Not Available | Positive | 5569921 - 5572146 | 83529.1 |
| hypothetical protein | BK654_24455 | Not Available | Positive | 5572163 - 5572621 | 16115.6 |
| hypothetical protein | BK654_24460 | Not Available | Positive | 5572636 - 5573751 | 40525.5 |
| 3-oxoacyl-acp synthase | BK654_24465 | Not Available | Positive | 5573748 - 5574785 | 36501.9 |
| hypothetical protein | BK654_24470 | Not Available | Positive | 5574785 - 5575873 | 39291.7 |
| hypothetical protein | BK654_24475 | Not Available | Positive | 5575883 - 5576791 | 33937.0 |
| hypothetical protein | BK654_24480 | Not Available | Positive | 5576837 - 5578123 | 47665.8 |
| plasmid replication region | BK654_24485 | Not Available | Negative | 5578173 - 5579153 | 37478.0 |
| integrase | BK654_24490 | Not Available | Positive | 5579233 - 5580369 | 40738.0 |
| hypothetical protein | BK654_24495 | Not Available | Positive | 5580429 - 5580965 | 19564.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
