Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | BK654_24400 | Not Available | Negative | 5558780 - 5560003 | 44656.6 |
| abc transporter atp-binding protein | BK654_24405 | Not Available | Negative | 5559993 - 5561627 | 59418.7 |
| peptide abc transporter permease | BK654_24410 | Not Available | Negative | 5561624 - 5562457 | 29698.3 |
| abc transporter | BK654_24415 | Not Available | Negative | 5562450 - 5563397 | 34058.0 |
| abc transporter substrate-binding protein | BK654_24420 | Not Available | Negative | 5563413 - 5564984 | 57242.0 |
| acetylornithine deacetylase | BK654_24425 | Not Available | Negative | 5565079 - 5566359 | 46145.9 |
| gntr family transcriptional regulator | BK654_24430 | Not Available | Positive | 5566430 - 5567200 | 28538.3 |
| hypothetical protein | BK654_24435 | Not Available | Positive | 5567904 - 5568386 | 17739.9 |
| hypothetical protein | BK654_24440 | Not Available | Positive | 5568700 - 5569107 | 15350.7 |
| hypothetical protein | BK654_24445 | Not Available | Positive | 5569190 - 5569597 | 15556.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
