Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein capi | BK654_24300 | Not Available | Positive | 5537796 - 5538767 | 36140.1 |
| dolichol-phosphate mannosyltransferase | BK654_24305 | Not Available | Positive | 5538794 - 5539537 | 27706.2 |
| lipid a biosynthesis, n-terminal | BK654_24310 | Not Available | Positive | 5539539 - 5539832 | 11179.6 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | BK654_24315 | Not Available | Positive | 5539834 - 5541357 | 57479.1 |
| amp-binding protein | BK654_24320 | Not Available | Positive | 5541578 - 5543230 | 59701.1 |
| 3-hydroxyacyl-coa dehydrogenase | BK654_24325 | Not Available | Positive | 5543275 - 5544036 | 25740.4 |
| acetyl-coa acetyltransferase | BK654_24330 | Not Available | Positive | 5544042 - 5545235 | 41159.0 |
| acyl-coa dehydrogenase | BK654_24335 | Not Available | Positive | 5545245 - 5546372 | 40768.8 |
| enoyl-coa hydratase | BK654_24340 | Not Available | Positive | 5546386 - 5547159 | 27716.7 |
| acyl-coa dehydrogenase | BK654_24345 | Not Available | Negative | 5547418 - 5548569 | 41524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
