Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | BK654_24250 | Not Available | Negative | 5527314 - 5528498 | 42776.3 |
| duf4440 domain-containing protein | BK654_24255 | Not Available | Positive | 5528673 - 5529194 | 19265.8 |
| rna polymerase subunit sigma | BK654_24260 | Not Available | Positive | 5529378 - 5529887 | 19644.5 |
| sugar abc transporter substrate-binding protein | BK654_24265 | Not Available | Positive | 5529884 - 5530831 | 34766.9 |
| tonb-dependent receptor | BK654_24270 | Not Available | Positive | 5530899 - 5533322 | 87226.7 |
| ribosomal protein s3ae | BK654_24275 | Not Available | Negative | 5533404 - 5533805 | 15434.8 |
| hypothetical protein | BK654_24280 | Not Available | Negative | 5534047 - 5534526 | 18963.0 |
| tetr family transcriptional regulator | BK654_24285 | Not Available | Negative | 5534583 - 5535152 | 21045.3 |
| phosphatidylserine synthase | BK654_24290 | Not Available | Positive | 5535274 - 5536617 | 50765.4 |
| arac family transcriptional regulator | BK654_24295 | Not Available | Positive | 5536629 - 5537645 | 38292.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
