Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase | BK654_24200 | Not Available | Negative | 5516291 - 5516923 | 23234.5 |
| tetr family transcriptional regulator | BK654_24205 | Not Available | Positive | 5517009 - 5517629 | 22362.9 |
| nitrite reductase large subunit | BK654_24210 | Not Available | Positive | 5518236 - 5520797 | 92574.5 |
| nitrite reductase small subunit | BK654_24215 | Not Available | Positive | 5520797 - 5521168 | 13867.5 |
| histidine kinase | BK654_24220 | Not Available | Positive | 5521350 - 5521790 | 16144.8 |
| short-chain dehydrogenase | BK654_24225 | Not Available | Positive | 5521976 - 5522740 | 26750.0 |
| arac family transcriptional regulator | BK654_24230 | Not Available | Negative | 5522932 - 5523828 | 33414.0 |
| two-component system response regulator | BK654_24235 | Not Available | Negative | 5523876 - 5524343 | 17838.8 |
| histidine kinase | BK654_24240 | Not Available | Negative | 5524340 - 5526652 | 84501.8 |
| dna-binding response regulator | BK654_24245 | Not Available | Negative | 5526649 - 5527317 | 23441.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
