Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | BK654_23945 | Not Available | Negative | 5445642 - 5447075 | 51562.7 |
| 2-dehydro-3-deoxyglucarate aldolase | BK654_23950 | Not Available | Negative | 5447087 - 5447887 | 28309.9 |
| l-rhamnonate dehydratase | BK654_23955 | Not Available | Negative | 5447899 - 5449083 | 43812.6 |
| mfs transporter | BK654_23960 | Not Available | Negative | 5449100 - 5450395 | 46505.4 |
| lysr family transcriptional regulator | BK654_23965 | Not Available | Positive | 5450512 - 5451468 | 35162.9 |
| cupin | BK654_23970 | Not Available | Positive | 5451745 - 5452236 | 17394.9 |
| 4-carboxymuconolactone decarboxylase | BK654_23975 | Not Available | Positive | 5452326 - 5453021 | 24578.3 |
| mfs transporter | BK654_23985 | Not Available | Negative | 5454184 - 5455329 | 39159.3 |
| rieske (2fe-2s) protein | BK654_23990 | Not Available | Negative | 5455469 - 5456704 | 46356.7 |
| 2-methylcitrate dehydratase | BK654_23995 | Not Available | Negative | 5456898 - 5458259 | 48522.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
