Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | BK654_23895 | Not Available | Negative | 5436446 - 5437300 | 32008.7 |
| phosphoglycerate mutase | BK654_23900 | Not Available | Positive | 5437591 - 5438169 | 21656.9 |
| precorrin-6a synthase (deacetylating) | BK654_23905 | Not Available | Positive | 5438166 - 5438924 | 28002.6 |
| transcriptional regulator ftra | BK654_23910 | Not Available | Negative | 5439094 - 5440053 | 34867.8 |
| rhodanese | BK654_23915 | Not Available | Positive | 5440156 - 5440590 | 15417.5 |
| porin | BK654_23920 | Not Available | Negative | 5440963 - 5442285 | 48846.2 |
| short-chain dehydrogenase | BK654_23925 | Not Available | Negative | 5442472 - 5443242 | 26388.7 |
| rhamnose/proton symporter rhat | BK654_23930 | Not Available | Negative | 5443271 - 5444329 | 38278.1 |
| l-rhamnose mutarotase | BK654_23935 | Not Available | Negative | 5444370 - 5444669 | 11398.6 |
| amidohydrolase | BK654_23940 | Not Available | Negative | 5444690 - 5445571 | 32652.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
