Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | BK654_23845 | Not Available | Negative | 5425888 - 5426289 | 15470.5 |
| lysr family transcriptional regulator | BK654_23850 | Not Available | Negative | 5426487 - 5427416 | 35126.9 |
| acyl-coa dehydrogenase | BK654_23855 | Not Available | Positive | 5427594 - 5428823 | 45339.9 |
| oxaloacetate decarboxylase | BK654_23860 | Not Available | Negative | 5429057 - 5429926 | 31737.0 |
| arginine n-succinyltransferase | BK654_23865 | Not Available | Negative | 5430085 - 5431119 | 38047.7 |
| arginine n-succinyltransferase | BK654_23870 | Not Available | Negative | 5431181 - 5432197 | 37400.4 |
| porin | BK654_23875 | Not Available | Negative | 5432306 - 5433655 | 48380.4 |
| n-formylglutamate amidohydrolase | BK654_23880 | Not Available | Negative | 5433714 - 5434466 | 27876.2 |
| glutamine synthetase | BK654_23885 | Not Available | Negative | 5434450 - 5435802 | 48871.1 |
| isochorismatase | BK654_23890 | Not Available | Negative | 5435799 - 5436443 | 24284.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
