Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | BK654_23745 | Not Available | Negative | 5403869 - 5404984 | 39028.4 |
| fad/nad(p)-binding oxidoreductase | BK654_23750 | Not Available | Negative | 5404981 - 5406336 | 48389.1 |
| ferredoxin | BK654_23755 | Not Available | Negative | 5406503 - 5406793 | 10375.5 |
| abc transporter permease | BK654_23760 | Not Available | Negative | 5406801 - 5407595 | 28731.0 |
| abc transporter permease | BK654_23765 | Not Available | Negative | 5407602 - 5408471 | 31700.1 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | BK654_23770 | Not Available | Negative | 5408468 - 5409493 | 37183.0 |
| iclr family transcriptional regulator | BK654_23775 | Not Available | Positive | 5409737 - 5410573 | 30321.5 |
| anti-sigma factor | BK654_23780 | Not Available | Negative | 5410707 - 5411459 | 27793.9 |
| rna polymerase subunit sigma-24 | BK654_23785 | Not Available | Negative | 5411456 - 5411962 | 19542.4 |
| catalase | BK654_23790 | Not Available | Positive | 5412130 - 5413209 | 38396.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
