Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 5380983 - 5381059 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 5381100 - 5381175 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 5381234 - 5381318 | Not Available |
| trigger factor | BK654_23660 | Not Available | Positive | 5381736 - 5383046 | 48550.7 |
| atp-dependent clp endopeptidase, proteolytic subunit clpp | BK654_23665 | Not Available | Positive | 5383140 - 5383781 | 23460.2 |
| atp-dependent protease atp-binding subunit clpx | BK654_23670 | Not Available | Positive | 5383889 - 5385172 | 47043.3 |
| endopeptidase la | BK654_23675 | Not Available | Positive | 5385333 - 5387729 | 88803.8 |
| dna-binding protein hu | BK654_23680 | Not Available | Positive | 5387878 - 5388150 | 9119.99 |
| Trna-his | Not Available | Not Available | Positive | 5388198 - 5388272 | Not Available |
| peptidylprolyl isomerase | BK654_23690 | Not Available | Positive | 5388375 - 5390246 | 68619.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
