Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscs | BK654_23490 | Not Available | Positive | 5348189 - 5349631 | 52608.3 |
| alkylhydroperoxidase | BK654_23495 | Not Available | Positive | 5349925 - 5350365 | 16519.7 |
| rna polymerase subunit sigma-24 | BK654_23500 | Not Available | Positive | 5350623 - 5351123 | 19205.8 |
| peptide abc transporter substrate-binding protein | BK654_23505 | Not Available | Positive | 5351161 - 5352144 | 36089.8 |
| amino acid abc transporter substrate-binding protein | BK654_23510 | Not Available | Positive | 5352243 - 5354678 | 88528.4 |
| mfs transporter | BK654_23515 | Not Available | Negative | 5354914 - 5356065 | 38817.9 |
| diaminopimelate epimerase | BK654_23520 | Not Available | Positive | 5356250 - 5357275 | 35958.5 |
| hypothetical protein | BK654_23525 | Not Available | Negative | 5357308 - 5357796 | 18231.5 |
| transcriptional regulator | BK654_23530 | Not Available | Negative | 5357930 - 5358217 | 10812.0 |
| tyrosine protein phosphatase | BK654_23540 | Not Available | Positive | 5358662 - 5359093 | 15097.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
