Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_23440 | Not Available | Negative | 5334186 - 5334512 | 11880.2 |
| rnd transporter | BK654_23445 | Not Available | Negative | 5335058 - 5336452 | 50646.9 |
| macrolide abc transporter permease/atp-binding protein macb | BK654_23450 | Not Available | Negative | 5336463 - 5338433 | 69615.4 |
| efflux transporter periplasmic adaptor subunit | BK654_23455 | Not Available | Negative | 5338434 - 5339585 | 41331.1 |
| rna polymerase subunit sigma | BK654_23460 | Not Available | Positive | 5340074 - 5340556 | 18661.5 |
| ornithine monooxygenase | BK654_23465 | Not Available | Positive | 5340701 - 5342035 | 49935.4 |
| hybrid sensor histidine kinase/response regulator | BK654_23470 | Not Available | Positive | 5342358 - 5345579 | 117250.0 |
| chemotaxis protein chey | BK654_23475 | Not Available | Positive | 5345723 - 5346157 | 15898.1 |
| two-component system response regulator | BK654_23480 | Not Available | Positive | 5346273 - 5346887 | 22938.2 |
| quercetin 2,3-dioxygenase | BK654_23485 | Not Available | Positive | 5347115 - 5347981 | 31590.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
