Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK654_23340 | Not Available | Positive | 5279727 - 5280719 | 35513.6 |
| alpha/beta hydrolase | BK654_23345 | Not Available | Negative | 5280688 - 5281590 | 33779.2 |
| hypothetical protein | BK654_23350 | Not Available | Negative | 5281619 - 5281996 | 14190.2 |
| hypothetical protein | BK654_23355 | Not Available | Positive | 5282638 - 5283006 | 13064.5 |
| hypothetical protein | BK654_23360 | Not Available | Positive | 5283485 - 5283853 | 13022.4 |
| glucoamylase | BK654_23365 | Not Available | Negative | 5283931 - 5285754 | 68917.7 |
| sugar dehydrogenase | BK654_23370 | Not Available | Negative | 5285747 - 5286547 | 27900.1 |
| cupin | BK654_23375 | Not Available | Negative | 5286859 - 5287992 | 41943.7 |
| trans-aconitate 2-methyltransferase | BK654_23380 | Not Available | Negative | 5288075 - 5288845 | 28309.7 |
| thioesterase | BK654_23385 | Not Available | Positive | 5289040 - 5289726 | 25421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
