Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BK654_23285 | Not Available | Negative | 5257177 - 5258802 | 60612.2 |
| abc transporter substrate-binding protein | BK654_23290 | Not Available | Negative | 5259059 - 5260660 | 59437.4 |
| hypothetical protein | BK654_23300 | Not Available | Positive | 5273792 - 5274205 | 15364.3 |
| urease-associated protein | BK654_23305 | Not Available | Negative | 5274521 - 5274922 | 14525.3 |
| vanillate o-demethylase oxidoreductase vanb | BK654_23310 | Not Available | Positive | 5275042 - 5275500 | 17677.9 |
| hypothetical protein | BK654_23315 | Not Available | Positive | 5275969 - 5276562 | 21461.2 |
| arac family transcriptional regulator | BK654_23320 | Not Available | Negative | 5276711 - 5277658 | 35095.4 |
| oxidoreductase | BK654_23325 | Not Available | Positive | 5277860 - 5278597 | 26238.7 |
| hypothetical protein | BK654_23330 | Not Available | Positive | 5278625 - 5278882 | 9823.29 |
| dimethylglycine dehydrogenase | BK654_23335 | Not Available | Negative | 5278943 - 5279629 | 24374.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
