Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_23235 | Not Available | Positive | 5245980 - 5246222 | 8738.9 |
| hypothetical protein | BK654_23240 | Not Available | Positive | 5246583 - 5247044 | 17392.2 |
| hypothetical protein | BK654_23245 | Not Available | Positive | 5247580 - 5247876 | 10805.7 |
| dipeptide abc transporter atp-binding protein | BK654_23250 | Not Available | Negative | 5248037 - 5249017 | 36185.8 |
| dipeptide abc transporter atp-binding protein dppd | BK654_23255 | Not Available | Negative | 5249017 - 5249985 | 34832.8 |
| dipeptide abc transporter permease dppc | BK654_23260 | Not Available | Negative | 5249996 - 5250907 | 32537.8 |
| peptide abc transporter permease | BK654_23265 | Not Available | Negative | 5250918 - 5251928 | 36973.3 |
| abc transporter substrate-binding protein | BK654_23270 | Not Available | Negative | 5252003 - 5253598 | 59004.4 |
| porin | BK654_23275 | Not Available | Negative | 5253675 - 5255096 | 51835.8 |
| abc transporter substrate-binding protein | BK654_23280 | Not Available | Negative | 5255268 - 5256869 | 59134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
