Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusa | BK654_23085 | Not Available | Positive | 5204695 - 5206176 | 54443.8 |
| translation initiation factor if-2 | BK654_23090 | Not Available | Positive | 5206204 - 5208732 | 90856.7 |
| ribosome-binding factor a | BK654_23095 | Not Available | Positive | 5208892 - 5209293 | 14979.0 |
| trna pseudouridine(55) synthase trub | BK654_23100 | Not Available | Positive | 5209298 - 5210215 | 33401.0 |
| 30s ribosomal protein s15 | BK654_23105 | Not Available | Positive | 5210355 - 5210624 | 10119.3 |
| polyribonucleotide nucleotidyltransferase | BK654_23110 | Not Available | Positive | 5210818 - 5212923 | 74977.4 |
| Trna-thr | Not Available | Not Available | Positive | 5213049 - 5213124 | Not Available |
| hypothetical protein | BK654_23120 | Not Available | Negative | 5213135 - 5213680 | 20192.7 |
| dephospho-coa kinase | BK654_23125 | Not Available | Positive | 5213981 - 5214286 | 11854.7 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | BK654_23130 | Not Available | Negative | 5214326 - 5215174 | 30362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
