Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--scyllo-inositol aminotransferase | BK654_22885 | Not Available | Negative | 5163819 - 5164934 | 40359.2 |
| c7-cyclitol-7-kinase | BK654_22890 | Not Available | Negative | 5164909 - 5165907 | 35855.9 |
| 3-dehydroquinate synthase | BK654_22895 | Not Available | Negative | 5165924 - 5167111 | 43523.2 |
| udp-n-acetylenolpyruvoylglucosamine reductase | BK654_22900 | Not Available | Positive | 5167292 - 5168308 | 37653.9 |
| autoinducer-binding transcriptional regulator | BK654_22905 | Not Available | Negative | 5168313 - 5169056 | 28326.0 |
| hypothetical protein | BK654_22910 | Not Available | Negative | 5169230 - 5169547 | 11678.3 |
| integrase | BK654_22915 | Not Available | Negative | 5169652 - 5170908 | 47655.7 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 5171095 - 5171492 | Not Available |
| hypothetical protein | BK654_22925 | Not Available | Negative | 5171587 - 5171877 | 10190.0 |
| 4fe-4s ferredoxin | BK654_22930 | Not Available | Negative | 5172003 - 5174813 | 102757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
