Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | BK654_22685 | Not Available | Negative | 5119998 - 5121152 | 40323.1 |
| hypothetical protein | BK654_22690 | Not Available | Negative | 5121149 - 5122573 | 51743.2 |
| abc transporter atp-binding protein | BK654_22695 | Not Available | Negative | 5122570 - 5123559 | 36148.3 |
| abc transporter atp-binding protein | BK654_22700 | Not Available | Negative | 5123556 - 5124572 | 36933.3 |
| peptide abc transporter permease | BK654_22705 | Not Available | Negative | 5124589 - 5125491 | 32112.3 |
| abc transporter permease | BK654_22710 | Not Available | Negative | 5125501 - 5126418 | 33076.6 |
| abc transporter substrate-binding protein | BK654_22715 | Not Available | Negative | 5126523 - 5128043 | 56386.9 |
| lysr family transcriptional regulator | BK654_22720 | Not Available | Positive | 5128228 - 5129145 | 33235.3 |
| hypothetical protein | BK654_22725 | Not Available | Negative | 5129215 - 5130129 | 32940.6 |
| alpha/beta hydrolase | BK654_22730 | Not Available | Positive | 5130369 - 5131385 | 37297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
