Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease | BK654_22630 | Not Available | Positive | 5106563 - 5107411 | 32069.5 |
| addiction module antidote protein, higa family | BK654_22640 | Not Available | Negative | 5109075 - 5109380 | 11146.6 |
| hypothetical protein | BK654_22645 | Not Available | Positive | 5109392 - 5109589 | 7253.81 |
| ligand-gated channel | BK654_22650 | Not Available | Negative | 5109937 - 5112309 | 86112.5 |
| siderophore-interacting protein | BK654_22655 | Not Available | Negative | 5112432 - 5113415 | 36444.0 |
| rna polymerase subunit sigma | BK654_22660 | Not Available | Negative | 5113402 - 5113917 | 19885.1 |
| asnc family transcriptional regulator | BK654_22665 | Not Available | Negative | 5114101 - 5114610 | 18676.9 |
| 1-aminocyclopropane-1-carboxylate deaminase | BK654_22670 | Not Available | Positive | 5114811 - 5115827 | 36815.2 |
| hypothetical protein | BK654_22675 | Not Available | Negative | 5116055 - 5116480 | 15965.1 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | BK654_22680 | Not Available | Positive | 5116525 - 5119221 | 99282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
