Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | BK654_22575 | Not Available | Negative | 5092574 - 5094049 | 55641.9 |
| type vi secretion system-associated protein | BK654_22580 | Not Available | Negative | 5094075 - 5094578 | 18331.2 |
| type vi secretion system impa domain-containing protein | BK654_22585 | Not Available | Negative | 5094611 - 5096167 | 58981.9 |
| type iv secretion protein rhs | BK654_22590 | Not Available | Positive | 5096611 - 5098680 | 77431.6 |
| hypothetical protein | BK654_22595 | Not Available | Positive | 5098677 - 5099528 | 32574.6 |
| hypothetical protein | BK654_22600 | Not Available | Positive | 5099525 - 5100298 | 29061.7 |
| lipase | BK654_22605 | Not Available | Positive | 5100311 - 5102494 | 81564.0 |
| hypothetical protein | BK654_22610 | Not Available | Negative | 5102638 - 5104143 | 53593.9 |
| nadh:ubiquinone oxidoreductase subunit n | BK654_22615 | Not Available | Negative | 5104300 - 5104935 | 24113.0 |
| hypothetical protein | BK654_22625 | Not Available | Negative | 5105770 - 5106042 | 10093.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
